sybil: strepneumo: search feature image generation [db=strepneumo_v15]
Sequence Selection [hide] Select sequences for display  
Organism Order Organism Name Assemblies Selected
Add All Organisms
Remove All Organisms
add/ remove
Streptococcus mitis B6
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae 670
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae 70585
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae ATCC 700669
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae BS292
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae BS293
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae BS397
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae BS455
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae BS457
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae BS458
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae CDC0288-04
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae CDC1087-00
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae CDC1873-00
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae CDC3059-06
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae CGSP14
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae D39
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae G54
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae Hungary19A-6
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae JJA
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae MLV-016
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae P1031
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae R6
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae SP11-BS70
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae SP14-BS69
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae SP18-BS74
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae SP19-BS75
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae SP195
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae SP23-BS72
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae SP3-BS71
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae SP6-BS73
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae SP9-BS68
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae TCH8431/19A
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae TIGR4
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae Taiwan19F-14
Organism Not Selected
[change]
add/ remove
Streptococcus pneumoniae capsular_loci
Organism Not Selected
[change]
Features [hide]
genes Optional: filter genes by keyword
pmark spacer graph pmark spacer density
tRNAgraph tRNA density
repeatmasker simple repeatsgraph repeatmasker simple repeats density
homopolymeric tractsgraph homopolymeric tracts density
tandem repeats detected by phobosgraph tandem repeats detected by phobos density
BoxA Repeatgraph BoxA Repeat density
BoxB Repeatgraph BoxB Repeat density
BoxC Repeatgraph BoxC Repeat density
RUP Repeatgraph RUP Repeat density
Genomic Island (from IslandPath)graph Genomic Island (from IslandPath) density
Signal Peptide (Neural Network)graph Signal Peptide (Neural Network) density
Signal Peptide (HMM)graph Signal Peptide (HMM) density
B-cell epitopes from BepiPredgraph B-cell epitopes from BepiPred density
antigenic regions from EMBOSS antigenicgraph antigenic regions from EMBOSS antigenic density
Lipoprotein Attachment Sitegraph Lipoprotein Attachment Site density
LPxTG motifgraph LPxTG motif density
Membrane surface protein motifgraph Membrane surface protein motif density
Bacteriocin protein motifgraph Bacteriocin protein motif density
Fibronectin binding protein motifgraph Fibronectin binding protein motif density
Transmembrane Regions (tmhmm)graph Transmembrane Regions (tmhmm) density
show percent gc
show gc skew
show atypical nucleotide composition (selfsim)
1 sequence per line
image width:
Generate Image [hide]
Generate Url
Draw
Output [hide]
scroll left
click 'Draw' to load an image
scroll right
sybil web site: sybil.sourceforge.net e-mail: driley@som.umaryland.edu