sybil: strepneumo: analyses : pipeline_summary (id=58) [db=strepneumo_v15]

ANALYSIS
 analysis/compute info. [help]
program pipeline_summary 2.0
algorithm pipeline_summary
description
load date 2010-09-03 11:12:00
PARAMETERS
 parameters used to run the analysis [help]
parameter name parameter value
bin_dir /usr/local/projects/ergatis/package-latest/bin
bsml_output_list /usr/local/projects/STREP/ALAB49//output_repository/pipeline_summary/2039454842_default/pipeline_summary.bsml.list
bsml_output_list /usr/local/projects/STREP/ALAB49//output_repository/pipeline_summary/2039454840_default/pipeline_summary.bsml.list
bsml_output_list /usr/local/projects/STREP/ALAB49//output_repository/pipeline_summary/2039454844_default/pipeline_summary.bsml.list
bsml_output_list /usr/local/projects/STREP/ALAB49//output_repository/pipeline_summary/2039454843_default/pipeline_summary.bsml.list
bsml_output_list /usr/local/projects/STREP/ALAB49//output_repository/pipeline_summary/2039454845_default/pipeline_summary.bsml.list
bsml_output_list /usr/local/projects/STREP/ALAB49//output_repository/pipeline_summary/2039454841_default/pipeline_summary.bsml.list
classification functional prediction
component_config /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454842_default/pipeline_summary.default.final.config
component_config /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454843_default/pipeline_summary.default.final.config
component_config /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454844_default/pipeline_summary.default.final.config
component_config /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454841_default/pipeline_summary.default.final.config
component_config /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454845_default/pipeline_summary.default.final.config
component_config /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454840_default/pipeline_summary.default.final.config
component_name pipeline_summary
component_xml /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454843_default/component.xml
component_xml /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454841_default/component.xml
component_xml /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454844_default/component.xml
component_xml /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454840_default/component.xml
component_xml /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454845_default/component.xml
component_xml /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454842_default/component.xml
componenturl /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454845_default/component.xml
componenturl /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454843_default/component.xml
componenturl /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454844_default/component.xml
componenturl /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454840_default/component.xml
componenturl /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454841_default/component.xml
componenturl /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454842_default/component.xml
debug 0
ergatis_dir /usr/local/projects/ergatis/package-latest/
fasta_nr_peptide /usr/local/db/panda/AllGroup/AllGroup.fasta
group_count 150
hmm_all /usr/local/projects/db/coding_hmm/coding_hmm.lib.bin
input_extension bsml
input_file_list /usr/local/projects/STREP/ALAB49//output_repository/p_func/2039454843_default/p_func.bsml.list
input_file_list /usr/local/projects/STREP/ALAB49//output_repository/p_func/2039454844_default/p_func.bsml.list
input_file_list /usr/local/projects/STREP/ALAB49//output_repository/p_func/2039454840_default/p_func.bsml.list
input_file_list /usr/local/projects/STREP/ALAB49//output_repository/p_func/2039454842_default/p_func.bsml.list
input_file_list /usr/local/projects/STREP/ALAB49//output_repository/p_func/2039454841_default/p_func.bsml.list
input_file_list /usr/local/projects/STREP/ALAB49//output_repository/p_func/2039454845_default/p_func.bsml.list
iterator1 i1
iterator1_xml /usr/local/projects/ergatis/package-latest/docs/pipeline_summary.i1.xml
lib_dir /usr/local/projects/ergatis/package-latest/lib
nodistrib 0
output_directory /usr/local/projects/STREP/ALAB49//output_repository/pipeline_summary/2039454842_default
output_directory /usr/local/projects/STREP/ALAB49//output_repository/pipeline_summary/2039454840_default
output_directory /usr/local/projects/STREP/ALAB49//output_repository/pipeline_summary/2039454841_default
output_directory /usr/local/projects/STREP/ALAB49//output_repository/pipeline_summary/2039454844_default
output_directory /usr/local/projects/STREP/ALAB49//output_repository/pipeline_summary/2039454843_default
output_directory /usr/local/projects/STREP/ALAB49//output_repository/pipeline_summary/2039454845_default
output_token default
pipeline_token unnamed
pipeline_xml /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline/2039454843/pipeline.xml
pipeline_xml /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline/2039454840/pipeline.xml
pipeline_xml /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline/2039454842/pipeline.xml
pipeline_xml /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline/2039454844/pipeline.xml
pipeline_xml /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline/2039454841/pipeline.xml
pipeline_xml /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline/2039454845/pipeline.xml
pipelineid 2039454840
pipelineid 2039454841
pipelineid 2039454843
pipelineid 2039454845
pipelineid 2039454842
pipelineid 2039454844
pipelineurl /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline/2039454841/pipeline.xml
pipelineurl /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline/2039454840/pipeline.xml
pipelineurl /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline/2039454845/pipeline.xml
pipelineurl /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline/2039454843/pipeline.xml
pipelineurl /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline/2039454844/pipeline.xml
pipelineurl /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline/2039454842/pipeline.xml
project gasalab49
project_config /usr/local/projects/STREP/ALAB49//workflow/project.config
project_id_repository /usr/local/projects/STREP/ALAB49/workflow/project_id_repository
release_tag $Name: $
repository_root /usr/local/projects/STREP/ALAB49/
revision $Revision: 1.3 $
simple_repeat_lib /usr/local/devel/ANNOTATION/RepeatMasker20020713/Libraries/simple.lib
software_config /usr/local/projects/ergatis/software.config
template_xml /usr/local/projects/ergatis/package-latest/docs/pipeline_summary.xml
tmp_dir /usr/local/scratch/gasalab49/pipeline_summary/2039454845_default
tmp_dir /usr/local/scratch/gasalab49/pipeline_summary/2039454843_default
tmp_dir /usr/local/scratch/gasalab49/pipeline_summary/2039454844_default
tmp_dir /usr/local/scratch/gasalab49/pipeline_summary/2039454841_default
tmp_dir /usr/local/scratch/gasalab49/pipeline_summary/2039454842_default
tmp_dir /usr/local/scratch/gasalab49/pipeline_summary/2039454840_default
workflow_repository /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454841_default
workflow_repository /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454842_default
workflow_repository /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454843_default
workflow_repository /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454845_default
workflow_repository /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454844_default
workflow_repository /usr/local/projects/STREP/ALAB49//workflow/runtime/pipeline_summary/2039454840_default
sybil web site: sybil.sourceforge.net e-mail: driley@som.umaryland.edu