sybil: strepneumo: protein SP6_377 [db=strepneumo_v15]
PROTEIN PROPERTIES properties of SP6_377
property value
organism
Streptococcus pneumoniae SP6-BS73
product name LPXTG-motif cell wall anchor domain protein
sequence length 1387 aa
created 2010-09-03 11:12:00
last modified 2010-09-03 11:12:00
DATABASE REFERENCES database refs for SP6_377
database accession version
PROTEIN CLUSTERS clusters of which SP6_377 is a member
cluster program algorithm analysis description
strepneumo_v15.match.2047595087.1 j_ortholog_clusters j_ortholog_clusters Ortholog Clusters
GENOMIC CONTEXT genomic context of the gene show_protein_clusters
sequence location strand
pneumoniae SP6-BS73 (2080085bp) (2.08 Mb) 573696-577860 +
additional feature types: pmark spacer tRNA repeatmasker simple repeats homopolymeric tracts tandem repeats detected by phobos BoxA Repeat BoxB Repeat BoxC Repeat RUP Repeat Genomic Island (from IslandPath) Signal Peptide (Neural Network) Signal Peptide (HMM) B-cell epitopes from BepiPred antigenic regions from EMBOSS antigenic Lipoprotein Attachment Site LPxTG motif Membrane surface protein motif Bacteriocin protein motif Fibronectin binding protein motif Transmembrane Regions (tmhmm)
Select All
Deselect All
display at most: 5 kb 10 kb 15 kb 25 kb 50 kb on either side of SP6_377:
BLASTP HITS proteins with significant BLASTP matches
show top: 5 10 20 50 BLASTP matches
highlighted proteins: none strepneumo_v15.match.2047595087.1
SEQUENCE the amino acid sequence in FASTA format
Download Protein FASTA
>SP6_377 polypeptide
LEAIARDESGKEIARDKITTAGKPAAVRLIKEDHAIAADGKDLTYIYYEIVDSQGNVVPTANNLVRFQLH
GQGQLVGVDNGEQASRERYKAQADGSWIRKAFNGKGVAIVKSTEQAGKFTLTAHSDLLKSNQVTVFTGKK
EGQEKTVLGTEVPKVQTIIGEAPEMPTTVPFVYSDGSRAERPVTWSSVDVSKPGIVTVKGMADGREVEAR
VEVIALKSELPVVKRIAPNTDLNSVDKSVSYVLTDGSVEEYEVDKWEIAEEDKAKLAIPGSRIQATGYLE
GQPIHATLVVEEGNPAAPAVPTVTVGGEAVTGLTSRQPMQYRTLSYGAQLPEVTASAENADVTVLQASAA
NGMRASIFIQPKDGGPLQTYAIQFLEEAPKIAHLSLQVEKADSLKEDQTVKLSVRAHYQDGTQAVLPADK
VTFSTSGEGEVAIRKGMLELHKPGAVTLNAEYEGAKGQVELTIQANTEKKIAQSIRPVNVVTDLHQEPSL
PATVTVEYDKGFPKTHKVTWQAIPKEKLDSYQTFEVLGKVEGIDLEARAKVSVEGIVSVEEVSVTTPIAE
APQLPESVRTYDSNGHVSSANIAWDAIRTEQYAKEGVFTVNGRLEGTQLTTKLHVRVSAQTEQGANISDQ
WTGSELPLAFASDSNPSDPVSNVNDKLISYNNQPANRWTNWNRTNPEASVGVLFGDSGILSKRSVDNLSV
GFHEDHGVGAPKSYVIEYYVGKTVPTAPKNPNFVGNEDHVFNDSANWKPVTNLKAPAQLKAGEMNHFSFD
KVETYAVRIRMVRADNKLGTSITEVQIFAKQVAAAKQGQTRIQVDGKDLANFNPDLTDYYLESVDGKVPA
VTASVSNNGLATVVPSVREGEPVRVIAKAENGDILGEYRLHFTKDKNLLSHKPVAAVKQARLLQVGQALE
LPTKVPVYFTGKDGYETKDLTVEWEEVPAENLTKAGQFTVRGRVLGSDLVAEVTVRVTDKLGEALSDNPN
YDENSNQAFASATNDIDKNSHDRVDYLNDGDHSENRRWTNWSPTPSSNPEVSAGVIFRENGKIVERTVAQ
AKLHFFADSGTDAPSKLVLERYVGPGFEVPTYYSNYQAYESGHPFNNPENWEAVPYRADKDIAAGDEINV
TFKAVKAKAMRWRMERKADKSGVAMIEMTFLAPSELPQESTQSKILVDGKELADFAENRQDYQITYKGQR
PKVSVEENNQVASTVVDSGEDSLPVLVRLVSESGKQVKEYRIHLTKEKPVSEKTVAAVQEDLPKLEFVEK
DLAYKTVEKKDSTLYLGETRVEQEGKVGKERIFTAINPDGSKEEKLREVVEAPTDRIVLVGTKPVAQEAK
KPQVSEKADTKPIDSSEASQTNKAQLPNTGSAASQAAGLALLGLSAGLVVTKGKKED
Download Nucleotide FASTA
>SP6_377 nucleotide
TTGGAAGCAATTGCTCGTGATGAATCTGGCAAGGAAATTGCTCGAGATAAGATTACGACTGCTGGTAAGC
CAGCGGCAGTTCGTCTTATTAAGGAAGACCATGCGATTGCAGCAGATGGAAAAGACTTGACTTACATCTA
CTATGAAATTGTTGACAGCCAGGGGAATGTGGTTCCAACTGCTAATAATCTGGTTCGCTTCCAATTGCAT
GGCCAAGGTCAACTGGTCGGTGTAGATAACGGAGAACAAGCCAGCCGTGAACGCTATAAGGCGCAAGCAG
ATGGTTCTTGGATTCGTAAAGCATTTAATGGTAAAGGTGTTGCCATTGTCAAATCAACTGAACAAGCAGG
GAAATTCACCCTTACTGCCCACTCTGATCTCTTGAAATCGAACCAAGTCACTGTCTTTACTGGTAAGAAA
GAAGGACAAGAGAAGACTGTTTTGGGGACAGAAGTGCCAAAAGTACAGACCATTATTGGAGAAGCACCTG
AAATGCCTACCACTGTTCCGTTTGTATACAGTGATGGTAGCCGTGCAGAACGTCCTGTAACCTGGTCTTC
AGTAGATGTGAGCAAGCCTGGTATTGTAACGGTGAAAGGTATGGCTGACGGACGAGAAGTAGAAGCTCGT
GTAGAAGTGATTGCTCTTAAATCAGAGCTACCAGTTGTGAAACGTATTGCTCCAAATACTGACTTGAATT
CTGTAGACAAATCTGTTTCCTATGTTTTGACTGATGGAAGTGTTGAAGAGTATGAAGTGGACAAGTGGGA
GATTGCCGAAGAAGATAAAGCTAAGTTAGCAATTCCAGGTTCTCGTATTCAAGCGACCGGTTATTTAGAA
GGTCAACCAATTCATGCAACCCTTGTGGTAGAAGAAGGCAATCCTGCGGCACCTGCAGTACCAACTGTAA
CGGTTGGTGGTGAAGCTGTCACAGGTCTTACTAGTCGACAACCAATGCAATATCGTACTCTATCTTATGG
TGCCCAACTGCCAGAAGTCACAGCAAGTGCTGAAAATGCTGATGTGACAGTTCTTCAAGCAAGCGCAGCA
AACGGCATGCGTGCGAGCATCTTTATTCAGCCTAAAGATGGTGGCCCTCTTCAAACCTATGCAATTCAAT
TCCTTGAAGAAGCGCCAAAAATTGCTCACTTGAGCTTGCAAGTGGAAAAAGCTGACAGTCTCAAAGAAGA
CCAAACTGTCAAATTGTCGGTTCGAGCTCACTATCAAGATGGAACGCAAGCTGTATTACCAGCTGATAAA
GTAACCTTCTCTACAAGTGGTGAAGGGGAAGTCGCAATTCGTAAAGGAATGCTTGAGTTGCATAAGCCAG
GAGCAGTCACTCTGAACGCTGAATATGAGGGAGCTAAAGGCCAAGTTGAACTCACTATCCAAGCCAATAC
TGAGAAGAAGATTGCGCAATCCATCCGTCCTGTAAATGTAGTGACAGATTTGCATCAGGAACCAAGTCTT
CCAGCAACAGTAACAGTTGAGTATGACAAAGGTTTCCCTAAAACTCATAAAGTCACTTGGCAAGCTATTC
CGAAAGAAAAACTAGACTCCTATCAAACATTTGAAGTACTAGGTAAAGTTGAAGGAATTGACCTTGAAGC
GCGTGCAAAAGTCTCTGTAGAAGGTATCGTTTCAGTTGAAGAAGTCAGTGTGACAACTCCAATCGCAGAA
GCACCACAATTACCAGAAAGCGTTCGGACATATGATTCAAATGGTCATGTTTCATCAGCTAATATTGCAT
GGGATGCGATTCGTACAGAGCAATACGCTAAGGAAGGTGTCTTTACAGTTAATGGTCGCTTAGAAGGTAC
TCAATTAACAACTAAACTTCATGTTCGCGTATCTGCTCAAACTGAGCAAGGTGCAAACATTTCTGACCAA
TGGACCGGTTCAGAATTGCCACTTGCCTTTGCTTCAGATTCAAATCCAAGCGACCCAGTTTCAAATGTTA
ATGACAAGCTCATTTCCTACAATAACCAACCAGCCAATCGTTGGACAAACTGGAATCGTACTAATCCAGA
AGCTTCAGTCGGTGTTCTGTTTGGAGATTCAGGTATCTTGAGCAAACGCTCCGTTGATAATCTAAGTGTC
GGATTCCACGAAGACCATGGAGTTGGTGCACCGAAGTCTTATGTGATTGAGTATTATGTTGGTAAGACTG
TCCCAACAGCTCCTAAAAACCCTAATTTTGTTGGTAATGAGGACCATGTCTTTAATGATTCTGCCAACTG
GAAACCAGTTACTAATCTAAAAGCCCCTGCTCAACTCAAGGCTGGAGAAATGAACCACTTTAGCTTTGAT
AAAGTTGAAACCTATGCTGTTCGTATTCGCATGGTGAGAGCAGACAACAAACTAGGAACGTCTATCACAG
AGGTACAAATCTTTGCGAAACAAGTTGCGGCAGCCAAGCAAGGACAAACAAGAATCCAAGTTGACGGCAA
AGACTTAGCAAACTTCAACCCTGATTTGACAGACTACTACCTTGAGTCTGTAGATGGAAAAGTTCCGGCA
GTCACAGCAAGTGTTAGCAACAATGGTCTCGCTACCGTCGTTCCAAGCGTTCGTGAAGGTGAGCCGGTTC
GTGTCATCGCGAAAGCTGAAAATGGCGACATCTTAGGAGAATACCGTCTGCACTTCACTAAGGATAAGAA
CTTACTTTCTCATAAACCAGTTGCTGCGGTTAAACAAGCTCGCTTGCTACAAGTAGGTCAAGCACTTGAA
TTGCCGACTAAGGTTCCAGTTTACTTCACAGGTAAAGACGGCTACGAAACAAAAGACCTGACAGTTGAAT
GGGAAGAAGTTCCAGCGGAAAATCTGACAAAAGCAGGTCAATTTACTGTTCGAGGCCGTGTCCTTGGTAG
TGACCTTGTTGCTGAGGTCACTGTACGAGTGACAGACAAACTTGGTGAGGCTCTTTCAGATAACCCTAAC
TATGATGAAAACAGTAACCAGGCCTTTGCTTCAGCAACCAATGATATTGACAAAAACTCTCATGACCGCG
TTGACTATCTCAATGACGGAGATCATTCAGAAAATCGTCGTTGGACAAACTGGTCACCAACACCATCTTC
TAATCCAGAAGTATCAGCGGGTGTGATCTTCCGTGAAAATGGTAAGATTGTAGAACGGACTGTTGCTCAA
GCCAAACTTCACTTCTTTGCAGATAGTGGTACAGATGCACCATCTAAACTTGTTTTGGAACGTTATGTCG
GCCCAGGCTTTGAAGTACCTACCTACTATTCAAACTACCAAGCCTACGAATCTGGACATCCATTTAACAA
TCCAGAAAATTGGGAAGCTGTGCCTTATCGTGCGGATAAAGACATCGCAGCTGGTGATGAAATCAACGTA
ACATTTAAAGCTGTCAAAGCCAAAGCTATGAGATGGCGTATGGAGCGTAAAGCAGATAAGAGCGGTGTTG
CGATGATTGAGATGACCTTCCTTGCACCAAGTGAATTGCCTCAAGAAAGCACGCAATCGAAGATTCTTGT
AGATGGAAAAGAACTTGCTGATTTCGCTGAAAATCGTCAAGACTATCAAATTACCTATAAAGGTCAACGG
CCAAAAGTCTCAGTTGAAGAAAACAATCAAGTAGCTTCAACTGTGGTAGATAGTGGAGAAGATAGCCTTC
CAGTACTTGTTCGCCTCGTTTCAGAAAGTGGAAAACAAGTCAAGGAATACCGTATCCACTTGACTAAGGA
AAAACCAGTTTCTGAGAAGACAGTTGCTGCTGTACAAGAAGATCTTCCAAAACTCGAATTTGTTGAAAAA
GATTTGGCCTACAAGACAGTTGAGAAAAAAGATTCAACACTGTATCTAGGTGAAACTCGTGTAGAACAAG
AAGGAAAAGTTGGAAAAGAACGTATCTTTACAGCGATTAATCCTGATGGAAGTAAGGAAGAAAAACTCCG
TGAAGTGGTAGAAGCTCCGACAGACCGCATCGTCTTGGTTGGAACCAAACCAGTAGCTCAAGAAGCTAAA
AAACCACAAGTGTCAGAAAAAGCAGATACAAAACCAATTGATTCAAGTGAAGCTAGTCAAACTAATAAAG
CCCAGTTACCAAATACAGGTAGTGCGGCAAGCCAAGCAGCAGGTTTAGCTCTTCTAGGTTTGAGTGCAGG
ATTAGTAGTTACTAAAGGTAAAAAAGAAGACTAG
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