sybil: strepneumo: protein smi_1534 [db=strepneumo_v15]
PROTEIN PROPERTIES properties of smi_1534
property value
organism
Streptococcus mitis B6
product name beta-galactosidase
sequence length 2391 aa
created 2010-09-03 11:12:00
last modified 2010-09-03 11:12:00
DATABASE REFERENCES database refs for smi_1534
database accession version
PROTEIN CLUSTERS clusters of which smi_1534 is a member
cluster program algorithm analysis description
strepneumo_v15.match.2047595087.1 j_ortholog_clusters j_ortholog_clusters Ortholog Clusters
GENOMIC CONTEXT genomic context of the gene show_protein_clusters
sequence location strand
mitis B6 (2146611bp) (2.15 Mb) 1554700-1561876 -
additional feature types: pmark spacer tRNA repeatmasker simple repeats homopolymeric tracts tandem repeats detected by phobos BoxA Repeat BoxB Repeat BoxC Repeat RUP Repeat Genomic Island (from IslandPath) Signal Peptide (Neural Network) Signal Peptide (HMM) B-cell epitopes from BepiPred antigenic regions from EMBOSS antigenic Lipoprotein Attachment Site LPxTG motif Membrane surface protein motif Bacteriocin protein motif Fibronectin binding protein motif Transmembrane Regions (tmhmm)
Select All
Deselect All
display at most: 5 kb 10 kb 15 kb 25 kb 50 kb on either side of smi_1534:
BLASTP HITS proteins with significant BLASTP matches
show top: 5 10 20 50 BLASTP matches
highlighted proteins: none strepneumo_v15.match.2047595087.1
SEQUENCE the amino acid sequence in FASTA format
Download Protein FASTA
>smi_1534 polypeptide
MRILMNKRLFDKRCHYSIRKFAIGVASVMIGASIFGISAVQAEEAASSNTQTEETTVHQAQPLDKLPDDV
AAAIAKADENGGREFVKPKSELAEDKVTKDTETTRPANDGSHELASPKVETPNKVEEGNKAEDKQKSEEA
NPKPVESAVTAGTEVRDDAKKTSEKDQVKQTTDIKSSSEKTQALSKESSKADVEKEKQLLSDRKQDFNKD
WYFKLNAQGDFSKKDVDVHDWSKLNLPHDWSIYFDFDHKSPARNEGGQLNGGTAWYRKIFTLNEADKNKD
VRINFDGVYMDSKVYVNGKFVGHYPSGYNHFSYDITEFLNKDGSENSITVQVTNKQPSSRWYSGSGIYRD
VTLSYRDKVHVAENGNHITTPKLAEQKNSNVETQVQSKIKNTDKTAANVFVEQQIFTKEGKAVSELVRSA
TKSLAENETAQFNQNIFVNQPTLWTTKSYHPQLYVLKTKVYKEGQLVDVTEDTFGYRYFNWTAKEGFSLN
GERMKFHGVSIHHDNGALGAEENYKATYRKLKLLKDMGVNSIRTTHNPASPQLLDAAASLGLLVQEEAFD
TWYGGKKTYDYGRFFDQDATHPEAKKGEKWSDFDLRTMVERDKNNPSIVMWSLGNEVEEANGSPHSIETA
KRLKAVIKAIDTERYVTMGENKFSRASTGDFLKVAEIMDAVGMNYGERNYDAVRRAHPDWLIYGSETSSA
TRTRDSYYNPARILGHDNSPNRHYEQSDYGNDRVGWGRTATESWTFDRDHAGYAGQFIWTGIDYIGEPTP
WHNQDNTPVKSSYFGIIDTAGLPKNDFYLYRSEWYSAKEKPTVRILPHWNWTDETLRDRKMLVDGKVPVR
TFSNAANVELFLNGESLGKKEFTKKRTEDGRPYHEGAKPSELYLEWLVKYQPGTLTAIARDENGNEIARD
SVTTAGEPARVRLTKEEHVITADGKDLSYIHYEIVDGEGNVVPTANNLVHFNLHGQGQIVGVDNGEQASR
ERYKAQADGTWQRRAFNGKGVVIVKSTEKEGKFTLYADSAGLTSDSATVATVSGKKENRHFIAYAPVKAT
TDVSTTPELPRTVTAIYSDGSVEEKDVTWKVPSDLLTSAGEKKVFGNVEGLEAKAEALVKVVALDKWLPK
VATVPVGTTAADLDKTVTAVLSDGSLIDTDVVSWTLKDPAALNKEGGRTEATGKLVDDDREVTATFIASS
KETTSSITGLTVGDKTLENFESGKTYYRVSLPYTATIPSVGAQTTGYQVTVQQASADNGYQASVFLSDQK
GDLVQTYLIQFVKEAPALTRLEVSVEGKEKATEDQVLPYHVIGHYEDGSQTEFAASDVHLEAKSADGGHL
EVNGQNLLLYTKGRVTLTPRIDNQTEKTKSVATELVIKENKVEKKIVKLHPVSISTDINQQPNLPSQVGA
EFDKGLPRKVAVTWDKVAEKELGHYHSFTLKGHVEGTDIEAQATVTVEGLQVAEEISLTLPKGETVQLPA
SVRAYHSNGTTIYKDVVWDQVPANFSQTEGVYEINGHLVGSNLTTKAHVRVSSQVVAGNNISKQWTGSQL
PAAIVSNTGGDDSANALNDLTVSRTPTDAKNRWTTWRTNTDNDWASILFGNSGDLTKRFVDNLSVDFYTD
GAIGLPKEYVIEYYVGQEVPDLPNDVNNAQRDSNHPFNNAANWKEVEHLKAPGQLSAGKTNHFTFDKVET
YAVRMRMKKADGTAGIGLTELTVLGNKVVSSTSSEISIKVDGKDLEHFNPSKTDYYIPQSSKEITATASN
NGLVTVVPATSEKGATRLILKAEDGTVLKEYRIFRDDEKESTQPAAAENSAKTLNVGDQLQLPAEVTVYY
PSQAGWVKANLAVQWDAIPEHATEQEGSFEVTGHVIGTNLTTKIQVTVVAKGNQVLSENPSNNEMDSKAF
ASATNDTQAASHDRIFYINDGKYNEDGRWTNWSRTPKNQETSVGLVFKKDGKIASQSIGKVAIQFFKDSG
TDAPEKMVLERYIGPAFTEPSTISRYEENADHPFNKAENWASIPYKASGELVAGKPIEFNFEPVQTTAIR
ARMTRKATTNGLAVVEFTAYSAGKGAEVETPSATISIDGKALENFDPNVTDYTLTAISSQPKVTATTSGH
GVVTVVNPGNTNLPTLVRLVSKDGNLVKEYRLHFKTAFQTTPTEGVKNLIAETPSLEIEKTPLPFKEVIR
ENPELAQGQRRVVSEGQAGEKVDYIQVSGATRTLVHTEQRKAQDRIIEVGVKPSISNSKGEEPAPVNEVP
EFKGGVNFVEASVNEVPEFKGGANFVEGAVNDISEYKGQQSTVGNQVAPVDEKPDFKDGVNPGVPQDSKL
PEDKAAPETVGNQEVPVRAKTEHPVQNIANNQTAERKASAVKGDQNSLPETGERESDTAIFLAGVSLALS
AALLATKRKED
Download Nucleotide FASTA
>smi_1534 nucleotide
ATGAGGATTTTAATGAACAAAAGACTTTTCGACAAACGTTGTCATTATAGCATTCGTAAATTTGCTATAG
GTGTGGCATCTGTGATGATTGGGGCTAGTATATTTGGTATTTCAGCTGTACAAGCTGAGGAGGCGGCTTC
ATCCAATACTCAAACAGAAGAAACAACGGTTCATCAAGCCCAACCTTTAGATAAGCTTCCTGATGATGTG
GCAGCTGCTATCGCAAAGGCTGATGAGAATGGTGGACGTGAGTTTGTAAAGCCAAAATCTGAATTGGCAG
AAGATAAAGTGACTAAGGATACAGAAACTACTAGACCTGCTAACGATGGTAGTCATGAATTGGCTAGTCC
TAAAGTGGAAACTCCAAATAAAGTAGAAGAAGGAAACAAAGCTGAGGACAAACAGAAATCTGAAGAGGCA
AATCCAAAGCCTGTTGAATCTGCAGTAACAGCTGGAACAGAAGTAAGAGATGATGCTAAAAAAACTTCAG
AAAAGGATCAGGTAAAACAGACTACAGATATCAAATCTTCTTCTGAAAAAACGCAAGCGCTTTCTAAAGA
GTCAAGTAAAGCGGATGTTGAAAAAGAGAAGCAGCTATTATCAGATCGAAAACAAGACTTCAATAAAGAT
TGGTACTTTAAACTAAACGCCCAAGGAGATTTTTCAAAAAAAGATGTGGATGTTCATGATTGGTCTAAAT
TGAATCTTCCACACGATTGGAGTATTTATTTTGACTTCGATCACAAGTCTCCTGCTCGTAACGAAGGTGG
ACAGTTAAATGGTGGAACAGCTTGGTATCGTAAGATTTTTACACTGAATGAAGCAGACAAAAACAAAGAT
GTTCGTATCAATTTTGATGGTGTTTACATGGATTCTAAGGTTTATGTAAATGGTAAATTTGTAGGACATT
ATCCAAGTGGTTACAATCATTTTTCTTATGATATTACAGAATTTTTGAACAAGGATGGCAGTGAAAATTC
CATTACTGTTCAAGTGACCAATAAGCAACCAAGTAGTCGTTGGTATTCTGGTAGTGGGATTTATCGTGAT
GTAACCCTTAGTTATCGTGATAAAGTCCATGTTGCGGAAAATGGGAACCACATTACAACACCAAAATTAG
CTGAACAAAAAAATAGCAACGTTGAAACACAAGTTCAAAGTAAGATTAAAAATACAGATAAAACAGCTGC
TAATGTCTTTGTGGAGCAACAGATTTTCACTAAGGAGGGTAAAGCTGTTTCAGAACTAGTTCGTTCTGCA
ACTAAGAGTTTGGCAGAAAATGAAACAGCACAATTTAATCAGAATATCTTTGTTAATCAGCCAACTCTTT
GGACAACGAAAAGTTACCATCCTCAACTTTATGTTCTAAAAACAAAAGTCTATAAAGAAGGCCAGTTAGT
TGATGTAACAGAAGATACATTTGGTTACCGTTATTTCAACTGGACAGCTAAGGAAGGATTTTCTCTCAAT
GGTGAGAGAATGAAATTCCATGGGGTAAGTATTCACCATGACAATGGAGCCTTGGGTGCAGAAGAGAACT
ATAAGGCTACTTATCGTAAATTAAAACTTCTGAAAGATATGGGAGTGAACTCCATTCGTACCACTCACAA
CCCGGCGAGCCCTCAGTTGCTAGATGCTGCGGCGAGTCTAGGACTTTTGGTTCAAGAGGAGGCTTTTGAC
ACTTGGTATGGTGGCAAGAAGACTTATGACTATGGACGGTTCTTTGATCAAGATGCAACTCATCCTGAAG
CTAAGAAGGGTGAGAAGTGGTCTGATTTTGATCTTAGAACAATGGTAGAACGTGATAAGAACAATCCGTC
TATTGTGATGTGGTCTCTTGGAAATGAGGTAGAGGAGGCAAATGGTAGTCCTCATTCTATTGAAACTGCT
AAACGTTTGAAGGCTGTTATCAAAGCGATTGATACTGAGCGTTACGTAACCATGGGTGAAAATAAATTTA
GTCGTGCATCTACAGGTGATTTCTTGAAAGTTGCAGAAATTATGGATGCTGTGGGTATGAACTATGGAGA
ACGCAATTATGATGCTGTTCGTAGAGCTCATCCAGATTGGCTCATTTATGGTTCTGAAACGTCTTCAGCG
ACAAGAACGCGTGATTCTTATTACAATCCTGCTCGAATTCTTGGACATGATAACAGTCCAAATCGTCATT
ATGAACAATCTGATTATGGTAATGACCGTGTTGGATGGGGAAGAACAGCTACTGAGTCATGGACTTTTGA
CCGTGATCATGCTGGCTATGCTGGACAATTTATCTGGACAGGAATTGACTATATCGGTGAACCAACTCCA
TGGCATAACCAAGATAATACACCCGTAAAAAGTTCTTACTTTGGTATCATCGATACGGCTGGTTTACCCA
AGAATGATTTTTACCTTTACCGTAGTGAATGGTATAGTGCTAAAGAAAAACCAACTGTCCGAATTTTACC
ACATTGGAACTGGACTGATGAGACACTTAGGGATCGTAAGATGCTGGTTGATGGAAAGGTTCCGGTTCGT
ACCTTCTCAAATGCAGCAAATGTCGAATTGTTCTTAAATGGAGAGTCACTTGGTAAAAAGGAATTTACTA
AGAAGAGAACCGAAGATGGACGTCCTTATCATGAGGGAGCTAAACCAAGTGAATTGTATCTTGAGTGGCT
CGTTAAATACCAACCAGGCACACTGACTGCGATTGCTCGAGATGAAAATGGCAACGAAATTGCGCGTGAT
AGTGTGACAACTGCTGGGGAGCCAGCAAGAGTTCGTCTGACTAAAGAAGAGCATGTTATCACAGCAGATG
GTAAAGATTTATCTTACATCCATTACGAAATTGTTGATGGCGAAGGGAATGTTGTTCCGACAGCGAATAA
TCTTGTTCATTTCAATCTCCATGGTCAGGGACAAATCGTTGGTGTAGATAATGGGGAACAAGCTAGTCGT
GAGCGCTACAAAGCTCAAGCAGATGGAACATGGCAGAGACGTGCCTTCAATGGTAAAGGGGTTGTCATTG
TAAAATCAACAGAAAAAGAAGGTAAATTTACTCTTTATGCAGATTCTGCTGGTTTAACATCTGATAGTGC
AACAGTTGCAACCGTGTCTGGTAAGAAAGAAAACCGTCACTTTATAGCCTATGCTCCTGTGAAGGCCACA
ACTGATGTGAGTACCACTCCTGAATTACCACGAACAGTAACAGCTATTTATAGTGATGGTAGTGTTGAAG
AAAAAGATGTGACTTGGAAAGTGCCATCTGACTTGCTTACAAGTGCAGGTGAGAAAAAAGTATTTGGTAA
TGTAGAAGGTCTCGAAGCTAAGGCTGAAGCCCTTGTCAAGGTAGTTGCACTTGATAAGTGGTTGCCTAAG
GTAGCGACAGTTCCAGTTGGTACAACGGCAGCTGATTTGGATAAAACGGTTACTGCTGTTTTGTCAGATG
GTAGCTTGATTGATACAGATGTTGTGTCTTGGACCTTGAAAGATCCTGCTGCTTTGAACAAGGAAGGTGG
ACGTACGGAGGCTACTGGTAAATTGGTAGATGACGACCGTGAAGTGACTGCAACCTTTATTGCAAGCAGT
AAGGAAACAACAAGTAGCATTACAGGACTTACTGTAGGGGATAAAACTCTTGAGAACTTCGAGTCTGGTA
AGACTTATTACCGTGTATCCCTTCCTTACACTGCAACCATTCCAAGTGTTGGAGCTCAGACTACCGGATA
TCAAGTAACTGTTCAGCAAGCTTCTGCTGATAATGGCTATCAGGCTTCTGTCTTCTTGAGTGACCAAAAG
GGTGACTTGGTTCAAACTTACTTGATTCAATTCGTGAAGGAAGCACCTGCTTTGACTCGTTTGGAAGTAA
GCGTTGAAGGAAAAGAGAAAGCAACAGAAGATCAAGTTCTCCCTTATCATGTGATTGGGCATTATGAGGA
TGGTTCACAGACGGAATTTGCAGCGTCAGATGTCCACTTGGAAGCCAAGTCAGCTGATGGTGGTCATCTT
GAAGTAAATGGACAGAACTTGTTGCTCTATACTAAGGGTCGTGTTACTCTAACTCCTCGTATTGACAATC
AAACAGAAAAAACGAAATCTGTCGCAACTGAATTGGTGATTAAAGAAAATAAAGTAGAGAAGAAAATTGT
AAAACTTCATCCAGTTTCTATCTCTACCGATATCAATCAGCAACCTAATTTACCTAGTCAAGTTGGAGCA
GAATTTGATAAAGGCTTGCCTCGTAAGGTAGCTGTAACTTGGGACAAAGTAGCTGAAAAAGAATTGGGGC
ACTATCATAGCTTTACCCTTAAAGGACATGTAGAAGGTACAGATATTGAGGCTCAAGCAACTGTGACGGT
TGAAGGCTTGCAAGTTGCAGAGGAAATCAGCCTTACTCTTCCTAAGGGTGAGACAGTTCAATTGCCAGCT
AGTGTACGTGCTTACCATTCTAATGGAACCACTATCTACAAAGATGTGGTTTGGGATCAGGTACCAGCTA
ACTTTAGTCAAACTGAAGGGGTGTATGAAATCAATGGTCATTTAGTTGGTAGCAATCTGACCACCAAGGC
TCATGTCCGTGTTTCTAGTCAAGTGGTTGCTGGAAATAATATCTCTAAACAATGGACAGGTTCACAATTG
CCAGCAGCTATTGTATCCAATACAGGAGGGGATGATTCAGCTAATGCTTTGAACGACCTGACTGTGTCAA
GAACGCCTACAGATGCTAAAAATAGATGGACTACTTGGAGAACAAATACTGATAATGACTGGGCATCAAT
CTTGTTTGGAAACTCTGGTGATTTGACCAAGCGCTTTGTTGATAATCTTTCAGTTGATTTCTATACTGAT
GGAGCGATTGGTCTTCCAAAAGAATATGTTATTGAATACTATGTCGGTCAAGAAGTTCCAGATCTTCCGA
ATGATGTCAATAATGCTCAACGTGATAGCAACCATCCATTTAATAATGCAGCTAACTGGAAAGAGGTGGA
ACACCTCAAAGCTCCTGGACAATTATCTGCAGGTAAAACCAACCACTTTACATTTGATAAGGTAGAAACC
TATGCTGTTCGTATGCGCATGAAGAAAGCAGATGGAACTGCTGGTATTGGTTTGACAGAGCTAACTGTCC
TTGGAAATAAGGTAGTGAGCTCTACAAGTTCAGAGATTTCTATCAAGGTAGATGGAAAGGATCTTGAACA
CTTCAATCCATCGAAGACAGATTATTATATTCCTCAATCTAGCAAAGAAATCACTGCAACAGCAAGCAAC
AATGGCTTGGTGACAGTTGTTCCTGCAACAAGTGAAAAAGGTGCGACACGTCTTATCTTGAAAGCTGAGG
ATGGAACTGTTCTGAAAGAATATCGTATCTTCCGTGATGACGAAAAAGAGTCAACACAACCAGCAGCTGC
AGAAAATAGTGCCAAGACACTGAATGTTGGTGATCAACTTCAATTGCCTGCTGAAGTGACAGTCTATTAT
CCTTCACAAGCTGGCTGGGTTAAGGCTAACCTTGCAGTTCAATGGGATGCCATTCCTGAACATGCGACAG
AACAGGAGGGAAGTTTTGAAGTAACTGGTCATGTCATTGGTACAAATCTAACAACTAAAATACAGGTGAC
AGTTGTAGCTAAAGGTAACCAAGTTCTGTCAGAAAATCCAAGCAACAATGAAATGGATTCTAAAGCCTTT
GCCTCGGCAACGAACGATACACAAGCAGCTTCACATGATAGAATTTTCTATATCAATGATGGAAAATACA
ATGAAGACGGACGTTGGACAAACTGGTCTCGTACTCCGAAAAATCAAGAAACTTCTGTCGGACTAGTCTT
TAAGAAGGATGGAAAAATTGCCTCTCAATCCATTGGAAAAGTGGCTATTCAGTTCTTTAAAGATAGTGGA
ACAGATGCTCCAGAGAAAATGGTTCTAGAAAGATATATTGGTCCTGCCTTTACAGAACCAAGTACGATTT
CTCGTTATGAAGAAAATGCTGACCATCCATTCAACAAGGCAGAAAATTGGGCATCAATCCCTTATAAAGC
TTCTGGAGAATTAGTAGCTGGTAAACCAATAGAGTTTAACTTTGAACCGGTTCAAACGACAGCTATTCGT
GCCCGCATGACTCGTAAGGCTACTACTAATGGTTTGGCAGTTGTAGAATTTACAGCCTACTCTGCAGGCA
AGGGAGCAGAAGTGGAAACACCATCAGCGACGATTTCGATCGATGGAAAAGCATTGGAAAATTTTGATCC
AAATGTGACAGATTATACACTAACAGCAATAAGTTCCCAACCAAAAGTCACTGCGACAACTAGTGGACAT
GGAGTAGTCACAGTTGTGAATCCTGGAAATACTAATCTTCCAACACTCGTTCGTCTTGTTTCCAAAGATG
GAAATCTTGTGAAAGAGTATCGTTTACACTTTAAGACAGCCTTCCAAACAACTCCGACAGAAGGAGTTAA
GAACTTAATAGCAGAAACTCCAAGCTTAGAAATTGAAAAGACTCCGCTTCCATTTAAAGAAGTTATTCGT
GAAAATCCTGAACTTGCTCAAGGTCAACGTCGTGTAGTTTCTGAAGGACAAGCTGGAGAAAAAGTTGACT
ATATTCAAGTATCAGGAGCTACTAGAACTCTTGTTCATACTGAACAAAGAAAGGCTCAAGATCGCATTAT
TGAGGTAGGAGTAAAACCATCTATTTCAAATAGCAAGGGCGAGGAGCCTGCGCCAGTCAACGAAGTTCCA
GAGTTCAAAGGAGGGGTCAACTTTGTAGAAGCATCGGTTAATGAAGTCCCTGAATTTAAGGGAGGAGCTA
ACTTTGTTGAAGGAGCAGTTAACGACATTTCAGAATACAAAGGGCAACAATCAACTGTAGGTAATCAGGT
AGCACCAGTCGATGAGAAGCCTGACTTTAAAGACGGGGTAAATCCAGGAGTGCCTCAAGATAGTAAACTT
CCAGAGGATAAAGCTGCTCCAGAAACAGTGGGAAATCAGGAAGTACCAGTTCGGGCGAAAACAGAGCATC
CAGTACAGAACATAGCTAATAACCAGACTGCAGAAAGAAAGGCTTCAGCAGTCAAGGGAGATCAAAATAG
CTTACCAGAAACTGGTGAGAGAGAATCTGATACAGCCATCTTCTTAGCAGGTGTTAGCTTGGCCTTGTCA
GCAGCACTATTGGCGACAAAACGTAAAGAAGATTAG
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